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Showing posts from 2019

Analysis of RNA-seq samples

Sequenced RNA-seq sampled are analyzed for disease identification and RNA-edit checking. Many stacked pipelines are used for this analysis. GATK, the Genome Analysis Toolkit from Broad Institute has a elaborated pipeline for sequence analysis. SPRINT, RNA edit identifying tool has integrated pipeline for sequence analysis. Normally, sequences are first mapped for aligning using several aligning tools, specially found one is BWA (Burrows-Wheeler Aligner). There are several other multi optioned analysis tools like, bcftools, vcftols, bedtools. In found RNA-edit there is also DNA mutations, and these can be filtered using dbSNP.

A Proposition of Mobile Ad hoc Network for Underwater

Abstract: This is a proposition of a wide network in the ocean or sea. This is not particularly an underwater construction but an infrastructure providing a specimen of ad hoc network's application on water. This work actually a work-in-progress. It has not experimentally tested yet. The structure tests the connection and flow-control of water. We will construct several self-organizing, round-shaped network nodes that can float above water. We will construct an internal electricity connection and wireless router for internet connectivity. The electricity of the node can control the flow of water while the nodes operate within themselves to establish the connection. This is a simple proposition and a general overview of how the internet can work over the network. Vehicles may want to connect to the network. For this connection, water-nodes provide a wireless sensor to detect devices. After nodes are connected via network sensors, they use the internet through the water nodes. The n...

Activities and Thoughts

I had been switched to understanding the development of the radius server in March and in June I have been transferred to Wimax, I worked on the Linux essentials up to March 1st. I closed all the doors of software development in March and tried to build skills on hardware/network. Then I also worked on Web development and Agile (frequent reassessment and development plans) tool development. Worked on also database modularity. I am obvious to forget things as I worked in diverse fields. I have also worked on developing several tools and understanding the packaging process until the last five years from 2014-2019. I was in huge mental pressure which forced me to forget many things and subjects by this time. Also, I have day-to-day anxiety with my personal life. I relate to study too frequently. I am forgetting words too frequently as I communicate in Bengali and use English words seldom. I practice very often, as I delve into the understanding system and practicing on my gained theo...